STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ13707.1Hypothetical protein; COG3070 Regulator of competence-specific genes. (103 aa)    
Predicted Functional Partners:
cobB-2
COG0846 NAD-dependent protein deacetylases, SIR2 family; Belongs to the sirtuin family. Class III subfamily.
    
   0.912
EAQ13708.1
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
       0.849
EAQ13709.1
Hypothetical protein; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
       0.814
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
       0.650
EAQ11839.1
Hypothetical protein.
    
   0.576
EAQ13705.1
Aromatic amino acid decarboxylase; COG0076 Glutamate decarboxylase and related PLP-dependent proteins.
       0.499
EAQ13704.1
Hypothetical protein; COG1512 Beta-propeller domains of methanol dehydrogenase type.
       0.498
EAQ13710.1
COG2154 Pterin-4a-carbinolamine dehydratase.
       0.475
EAQ13711.1
Hypothetical protein.
       0.475
EAQ12564.1
Hypothetical protein.
  
     0.435
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.