STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ13709.1Hypothetical protein; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme. (131 aa)    
Predicted Functional Partners:
EAQ11556.1
Cysteine desulfurase SufS; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.978
EAQ11560.1
FeS assembly ATPase SufC; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
  
 0.960
EAQ11561.1
FeS assembly protein SufB; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
   
 0.955
EAQ11559.1
FeS assembly protein SufD; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
   
 0.922
EAQ13708.1
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
  
  
 0.852
EAQ11579.1
Hypothetical protein; COG0822 NifU homolog involved in Fe-S cluster formation.
 
    0.840
EAQ12706.1
Phenylacetic acid degradation protein PaaH; COG3460 Uncharacterized enzyme of phenylacetate metabolism.
  
 
 0.836
EAQ13707.1
Hypothetical protein; COG3070 Regulator of competence-specific genes.
       0.814
EAQ10540.1
COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 
 0.766
EAQ11795.1
Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 
 0.766
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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