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RB2654_03509 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_03509" - Transcriptional regulator, TetR family protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_03509Transcriptional regulator, TetR family protein (207 aa)    
Predicted Functional Partners:
RB2654_03514
Uncharacterized protein (289 aa)
              0.891
RB2654_03469
Uncharacterized protein (172 aa)
 
          0.782
metA
Homoserine O-transsuccinylase (305 aa)
              0.782
RB2654_03519
Predicted hydrolase or acyltransferase (Alpha/beta hydrolase) (315 aa)
              0.764
RB2654_03529
Uncharacterized protein (286 aa)
              0.639
RB2654_19638
Serine--glyoxylate transaminase, putative (397 aa)
   
          0.549
RB2654_04219
Uncharacterized protein (517 aa)
   
          0.541
RB2654_03574
Uncharacterized protein (351 aa)
   
          0.539
RB2654_04844
Uncharacterized protein (189 aa)
   
          0.532
RB2654_03539
Membrane protein, putative (304 aa)
              0.498
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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