STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ13760.1COG5598 Trimethylamine:corrinoid methyltransferase; Belongs to the trimethylamine methyltransferase family. (518 aa)    
Predicted Functional Partners:
EAQ11503.1
Putative dimethylamine corrinoid protein; COG5012 Predicted cobalamin binding protein.
  
 0.892
EAQ11498.1
Hypothetical protein.
 
     0.801
EAQ10942.1
Iron-sulfur cluster-binding protein; COG3894 Uncharacterized metal-binding protein.
 
     0.801
EAQ11280.1
Hypothetical protein.
 
     0.799
EAQ11281.1
Hypothetical protein; COG1410 Methionine synthase I, cobalamin-binding domain.
 
     0.784
EAQ12400.1
metF-like protein; COG0685 5,10-methylenetetrahydrofolate reductase.
 
    0.753
EAQ11505.1
COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain.
  
     0.720
EAQ13109.1
COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
    
  0.677
EAQ11315.1
COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
    
  0.677
EAQ10601.1
DNA-binding protein, putative; COG1396 Predicted transcriptional regulators.
  
     0.651
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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