STRINGSTRING
RB2654_03969 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_03969" - Peptidase, M48 family protein in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_03969Peptidase, M48 family protein (227 aa)    
Predicted Functional Partners:
RB2654_02614
Transporter, BCCT family protein (576 aa)
     
      0.708
RB2654_19928
L-threonine aldolase, low-specificity, putative (350 aa)
       
      0.706
RB2654_20848
Uncharacterized protein (339 aa)
   
          0.622
RB2654_03964
Uncharacterized protein (239 aa)
              0.610
RB2654_10254
OmpA domain protein (797 aa)
   
   
  0.606
RB2654_00950
Uncharacterized protein (141 aa)
   
          0.559
RB2654_01105
Uncharacterized protein (136 aa)
     
  0.556
RB2654_12159
Uncharacterized protein (577 aa)
 
          0.553
RB2654_13484
Putative Smr (197 aa)
       
      0.546
RB2654_14455
MiaB-like tRNA modifying enzyme (77 aa)
   
          0.525
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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