STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ11563.1Iron-sulfur cluster assembly transcription factor IscR, putative; COG1959 Predicted transcriptional regulator. (143 aa)    
Predicted Functional Partners:
EAQ11562.1
Putative aminotransferase; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
 
 
 0.993
EAQ11579.1
Hypothetical protein; COG0822 NifU homolog involved in Fe-S cluster formation.
  
 
 0.969
EAQ11561.1
FeS assembly protein SufB; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
     
 0.850
EAQ13708.1
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
 
  
 0.814
EAQ11558.1
Hypothetical protein.
     
 0.765
EAQ11559.1
FeS assembly protein SufD; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
     
 0.755
EAQ11560.1
FeS assembly ATPase SufC; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
     
 0.747
EAQ11557.1
Hypothetical protein; COG0628 Predicted permease.
     
 0.720
EAQ11564.1
Hypothetical protein; COG2945 Predicted hydrolase of the alpha/beta superfamily.
       0.690
EAQ11565.1
Hypothetical protein.
       0.675
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.