STRINGSTRING
RB2654_04731 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_04731" - Putative Competence protein in Maritimibacter alkaliphilus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_04731Putative Competence protein (700 aa)    
Predicted Functional Partners:
RB2654_06524
DNA processing protein DprA, putative (375 aa)
 
   
  0.792
RB2654_04741
Glutamyl-tRNA synthetase (278 aa)
   
        0.786
RB2654_04736
Glutamyl-tRNA synthetase (196 aa)
   
        0.786
RB2654_13439
Competence protein F, putative (238 aa)
 
   
  0.783
RB2654_08917
Competence protein ComM (504 aa)
   
   
  0.749
RB2654_13329
DNA repair protein RadC (257 aa)
 
   
  0.572
RB2654_15544
Uncharacterized protein (340 aa)
 
        0.556
RB2654_16761
Cell division protein FtsX (301 aa)
   
 
      0.526
RB2654_16231
Uncharacterized protein (213 aa)
 
          0.513
rsfS
Ribosomal silencing factor RsfS ; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation (122 aa)
 
        0.512
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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