STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ10926.1COG2913 Small protein A (tmRNA-binding). (170 aa)    
Predicted Functional Partners:
EAQ13490.1
Putative quinoprotein; COG1520 FOG: WD40-like repeat.
  
 
 
 0.978
bamD
Putative ComL lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 0.951
bamA
Putative outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 
 0.944
EAQ14423.1
COG0729 Outer membrane protein.
    
 
 0.924
EAQ10925.1
COG3176 Putative hemolysin.
       0.836
EAQ10927.1
Hypothetical protein; COG1399 Predicted metal-binding, possibly nucleic acid-binding protein.
 
     0.762
EAQ10512.1
Hypothetical protein.
  
     0.744
EAQ11946.1
COG3750 Uncharacterized protein conserved in bacteria.
  
   
 0.713
EAQ10924.1
ABC transporter, ATP-binding protein; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.
       0.656
EAQ14641.1
Hypothetical protein; COG1192 ATPases involved in chromosome partitioning.
  
     0.638
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.