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RB2654_05190 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_05190" - Short-chain dehydrogenase in Maritimibacter alkaliphilus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_05190Short-chain dehydrogenase (255 aa)    
Predicted Functional Partners:
pgk
Phosphoglycerate kinase (397 aa)
   
        0.860
RB2654_20288
Short-chain dehydrogenase/reductase (248 aa)
 
  0.765
RB2654_21598
3-oxoacyl-[acyl-carrier protein] reductase (261 aa)
 
  0.759
RB2654_23453
Probable short chain dehydrogenase (227 aa)
 
  0.750
RB2654_10144
Possible oxidoreductase Short-chain dehydrogenase/reductase SDR (285 aa)
 
  0.747
RB2654_21738
Short-chain dehydrogenase/reductase SDR (254 aa)
 
  0.744
RB2654_17561
Oxidoreductase, short chain dehydrogenase/reductase family protein (309 aa)
 
  0.708
RB2654_23518
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase (267 aa)
 
  0.707
RB2654_21698
Short chain dehydrogenase (252 aa)
 
  0.703
RB2654_19363
3-oxoacyl-(Acyl-carrier protein) reductase (265 aa)
 
  0.701
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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