STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ11090.1Helicase, putative; COG0513 Superfamily II DNA and RNA helicases. (919 aa)    
Predicted Functional Partners:
EAQ11089.1
S4 domain protein; COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog).
 
     0.877
EAQ11091.1
Hypothetical protein; COG0457 FOG: TPR repeat.
       0.794
EAQ11088.1
Iron-sulfur cluster-binding protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.754
EAQ11087.1
Transcriptional regulator, CarD family protein; COG1329 Transcriptional regulators, similar to M. xanthus CarD.
 
     0.711
EAQ12910.1
Hypothetical protein.
  
     0.675
EAQ11092.1
COG3255 Putative sterol carrier protein.
       0.647
EAQ11093.1
Hydrolase, alpha/beta fold family protein; COG2267 Lysophospholipase.
       0.637
EAQ12014.1
Cobalt chelatase, pCobT subunit; COG4547 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase).
  
     0.587
EAQ12024.1
DnaJ domain protein; COG2214 DnaJ-class molecular chaperone.
  
     0.565
cobB
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
   
    0.504
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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