STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ10428.1Hypothetical protein. (104 aa)    
Predicted Functional Partners:
EAQ13185.1
COG0346 Lactoylglutathione lyase and related lyases.
   
    0.721
EAQ14481.1
Hypothetical protein.
  
     0.692
EAQ13401.1
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
  
     0.683
nusB
Putative N utilization substance protein B; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
       0.624
EAQ15023.1
Hypothetical protein.
  
     0.573
EAQ15038.1
Antibiotic biosynthesis monooxygenase domain protein.
  
     0.572
EAQ14245.1
Hypothetical protein.
  
     0.510
ribH
6,7-dimethyl-8-ribityllumazine synthase beta chain; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
       0.509
EAQ13815.1
Hypothetical protein.
  
     0.500
EAQ13976.1
Hypothetical protein; COG0510 Predicted choline kinase involved in LPS biosynthesis.
  
     0.500
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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