STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ12713.1Phenylacetic acid degradation protein PaaD; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. (144 aa)    
Predicted Functional Partners:
EAQ12707.1
Phenylacetic acid degradation protein PaaI.
 
 
 0.985
EAQ12706.1
Phenylacetic acid degradation protein PaaH; COG3460 Uncharacterized enzyme of phenylacetate metabolism.
 
 
 0.983
EAQ12708.1
Phenylacetic acid degradation protein PaaJ; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
 
 
 0.982
EAQ12712.1
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.982
EAQ12705.1
Putative phenylacetic acid degradation protein.
 
 
 0.981
EAQ12709.1
Phenylacetic acid degradation oxidoreductase PaaK; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
 
  0.929
EAQ12710.1
Phenylacetic acid degradation protein, putative.
 
 
 0.923
EAQ12715.1
Phenylacetic acid degradation protein PaaZ; COG1012 NAD-dependent aldehyde dehydrogenases.
 
 
 0.920
EAQ12714.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 
 0.907
EAQ12711.1
Transcriptional regulator, TetR family protein; COG1309 Transcriptional regulator.
 
     0.883
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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