STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ12787.1Hypothetical protein; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component. (171 aa)    
Predicted Functional Partners:
EAQ12786.1
TRAP dicarboxylate transporter, DctM subunit; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 0.884
EAQ12784.1
COG2124 Cytochrome P450.
       0.773
EAQ12785.1
Hypothetical protein; COG2124 Cytochrome P450.
       0.773
EAQ12788.1
Probable extracellular solute-binding protein; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
 
 0.722
EAQ12358.1
COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component.
    
  0.596
EAQ14806.1
Hypothetical protein; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
   
  0.588
EAQ12360.1
Bacterial extracellular solute-binding protein, family 7; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
   
 
 0.576
EAQ12359.1
Hypothetical protein; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
   
 
  0.542
EAQ13607.1
TrapT family, dctM subunit, C4-dicarboxylate transport; COG0609 ABC-type Fe3+-siderophore transport system, permease component.
  
 0.511
EAQ12789.1
Hypothetical protein; COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family.
       0.511
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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