STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ12811.1COG0464 ATPases of the AAA+ class. (627 aa)    
Predicted Functional Partners:
EAQ12808.1
Hypothetical protein.
 
     0.952
EAQ12809.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
 
     0.952
EAQ12812.1
Hypothetical protein.
 
     0.952
EAQ12814.1
Hypothetical protein.
 
     0.944
EAQ12815.1
Hypothetical protein.
 
     0.944
EAQ12816.1
COG3497 Phage tail sheath protein FI.
     0.941
EAQ12805.1
COG3501 Uncharacterized protein conserved in bacteria.
 
     0.913
EAQ12806.1
Hypothetical protein.
 
     0.913
EAQ12799.1
Hypothetical protein.
 
     0.907
EAQ12800.1
Hypothetical protein.
 
     0.907
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.