STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ12881.1COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components. (333 aa)    
Predicted Functional Partners:
EAQ12882.1
Ribose ABC transporter, ATP-binding protein; COG1129 ABC-type sugar transport system, ATPase component.
 
 0.989
EAQ12883.1
COG1879 ABC-type sugar transport system, periplasmic component.
 
 0.961
rbsA
Ribose ABC transporter, ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.953
rbsA-2
Putative atp-binding abc transporter protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.953
EAQ11874.1
Hypothetical protein; COG1879 ABC-type sugar transport system, periplasmic component.
 
 0.930
EAQ11869.1
COG1129 ABC-type sugar transport system, ATPase component.
 0.871
EAQ13286.1
Putative periplasmic binding abc transporter protein; COG1879 ABC-type sugar transport system, periplasmic component.
 0.868
EAQ12895.1
COG1879 ABC-type sugar transport system, periplasmic component.
 
 0.845
EAQ11867.1
COG1879 ABC-type sugar transport system, periplasmic component.
  
 0.767
EAQ12884.1
COG1609 Transcriptional regulators.
 
 
 0.749
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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