STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ12882.1Ribose ABC transporter, ATP-binding protein; COG1129 ABC-type sugar transport system, ATPase component. (544 aa)    
Predicted Functional Partners:
EAQ12881.1
COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
 0.989
EAQ12883.1
COG1879 ABC-type sugar transport system, periplasmic component.
 
 0.981
EAQ11868.1
Putative permease abc transporter protein; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 0.973
EAQ11872.1
COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 0.955
EAQ13284.1
Putative permease abc transporter protein; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 0.954
EAQ11871.1
Ribose ABC transporter; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 0.949
EAQ13283.1
Putative permease abc transporter protein; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 0.949
EAQ11874.1
Hypothetical protein; COG1879 ABC-type sugar transport system, periplasmic component.
 
 0.926
EAQ13286.1
Putative periplasmic binding abc transporter protein; COG1879 ABC-type sugar transport system, periplasmic component.
 
 0.857
EAQ12895.1
COG1879 ABC-type sugar transport system, periplasmic component.
  
 0.829
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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