STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ11926.1Bacterial regulatory protein, MarR; COG1846 Transcriptional regulators. (161 aa)    
Predicted Functional Partners:
EAQ11924.1
Hypothetical protein; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
     0.800
EAQ11925.1
Hypothetical protein; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
       0.773
EAQ11927.1
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
       0.773
EAQ11928.1
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.773
EAQ11923.1
TrapT family, dctP subunit, C4-dicarboxylate periplasmic binding protein; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
     0.687
EAQ12792.1
Bacterial regulatory protein, MarR; COG1846 Transcriptional regulators.
  
     0.673
EAQ14029.1
feruloyl-CoA synthase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
     0.574
EAQ12868.1
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
     0.573
EAQ13223.1
feruloyl-CoA synthase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
     0.568
EAQ15035.1
COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
  
    0.452
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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