STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ11940.1COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components. (336 aa)    
Predicted Functional Partners:
EAQ11941.1
Putative permease; COG4176 ABC-type proline/glycine betaine transport system, permease component.
 
 0.998
EAQ11942.1
Hypothetical protein; COG4175 ABC-type proline/glycine betaine transport system, ATPase component.
 
 0.990
EAQ12269.1
ABC glycine betaine/L-proline transporter, inner membrane subunit; COG4176 ABC-type proline/glycine betaine transport system, permease component.
 
 0.990
EAQ12855.1
Hypothetical protein; COG4176 ABC-type proline/glycine betaine transport system, permease component.
 
 0.978
EAQ12854.1
Hypothetical protein; COG4176 ABC-type proline/glycine betaine transport system, permease component.
 
 0.973
EAQ12268.1
ABC glycine betaine/L-proline transporter, ATPase subunit, ProV; COG4175 ABC-type proline/glycine betaine transport system, ATPase component.
  
 0.959
EAQ12856.1
Hypothetical protein; COG4175 ABC-type proline/glycine betaine transport system, ATPase component.
 
 0.952
EAQ12272.1
Putative glycine betaine-binding abc transporter protein; COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components.
     
  0.921
EAQ12857.1
Hypothetical protein; COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components.
     
  0.588
EAQ13570.1
Transporter, BCCT family protein; COG1292 Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family.
    
 0.505
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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