STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ11955.1Transcriptional regulator, putative; COG1396 Predicted transcriptional regulators. (435 aa)    
Predicted Functional Partners:
EAQ11952.1
Sensor histidine kinase; COG0591 Na+/proline symporter.
 
   
 0.855
EAQ11954.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
     0.730
EAQ11953.1
Hypothetical protein.
 
     0.721
EAQ10580.1
Phasin, PhaP; COG0840 Methyl-accepting chemotaxis protein.
  
     0.637
EAQ13525.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.634
EAQ11957.1
COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
     0.628
EAQ11951.1
Possible flagellar switch protein FliM.
 
     0.559
EAQ11837.1
Putative uncharacterized protein; Related to capsule biosynthesis enzyme; COG3550 Uncharacterized protein related to capsule biosynthesis enzymes.
  
 
 0.546
EAQ14848.1
COG3409 Putative peptidoglycan-binding domain-containing protein.
  
     0.533
EAQ11956.1
Hypothetical protein.
       0.532
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.