STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ10627.1Cytochrome b, putative; COG3658 Cytochrome b. (199 aa)    
Predicted Functional Partners:
EAQ10626.1
Transcriptional regulator, LuxR family protein; COG2771 DNA-binding HTH domain-containing proteins.
     0.951
EAQ10628.1
Hypothetical protein; COG2984 ABC-type uncharacterized transport system, periplasmic component.
       0.799
EAQ14574.1
Transcriptional regulator, LuxR family protein; COG2771 DNA-binding HTH domain-containing proteins.
     0.672
EAQ13585.1
Transcriptional regulator, LuxR family protein; COG2771 DNA-binding HTH domain-containing proteins.
     0.669
EAQ13584.1
Transcriptional regulator, LuxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
  
     0.600
EAQ14791.1
Hypothetical protein; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
 
 0.554
EAQ12184.1
Glycosyl transferase, family 2; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
  
 0.479
EAQ10629.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.473
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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