STRINGSTRING
RB2654_08077 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_08077" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_08077Uncharacterized protein (238 aa)    
Predicted Functional Partners:
RB2654_05767
Lipoprotein, putative (759 aa)
   
          0.690
RB2654_08082
Iron-sulfur cluster-binding protein (107 aa)
              0.667
RB2654_17221
Uncharacterized protein (266 aa)
   
          0.630
RB2654_04766
Uncharacterized protein (243 aa)
   
          0.620
RB2654_05957
Lipoprotein, putative (211 aa)
   
          0.607
RB2654_17701
Uncharacterized protein (108 aa)
   
          0.570
RB2654_11133
Uncharacterized protein (207 aa)
   
          0.569
RB2654_05607
MOSC domain protein (197 aa)
   
          0.539
RB2654_03469
Uncharacterized protein (172 aa)
   
          0.524
RB2654_07741
Branched-chain amino acid ABC transporter, periplasmic substrate-binding protein (449 aa)
   
          0.518
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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