STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ12184.1Glycosyl transferase, family 2; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB. (684 aa)    
Predicted Functional Partners:
EAQ14203.1
TPR domain protein; COG0457 FOG: TPR repeat.
 
 0.957
EAQ11091.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
 0.955
EAQ13836.1
Hypothetical protein.
  
 0.950
EAQ14057.1
DNA repair protein RadC; COG0642 Signal transduction histidine kinase; Belongs to the UPF0758 family.
  
    0.915
EAQ13003.1
Diguanylate cyclase, putative; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
 
 0.834
EAQ12345.1
Hypothetical protein; COG2202 FOG: PAS/PAC domain.
  
  
 0.828
EAQ14889.1
Putative diguanylate phosphodiesterase (EAL domain) with GAF sensor; COG2200 FOG: EAL domain.
  
 
 0.828
EAQ12743.1
DNA processing protein DprA, putative; COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake.
  
    0.807
EAQ13583.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
 
 0.759
EAQ10410.1
Polysaccharide deacetylase family protein; COG0726 Predicted xylanase/chitin deacetylase.
  
 
 0.759
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.