STRINGSTRING
RB2654_08297 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_08297" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_08297Uncharacterized protein (289 aa)    
Predicted Functional Partners:
RB2654_08302
Prephenate dehydrogenase (308 aa)
 
          0.854
hisC
Imidazole acetol-phosphate transaminase (367 aa)
              0.833
RB2654_19733
Peptidoglycan binding domain protein (584 aa)
   
          0.719
RB2654_08292
Serine-pyruvate aminotransferase (379 aa)
              0.692
RB2654_08312
Uncharacterized protein (125 aa)
              0.546
RB2654_21343
Uncharacterized protein (287 aa)
   
          0.522
RB2654_16956
Putative DNA repair enzyme (549 aa)
   
          0.515
RB2654_04844
Uncharacterized protein (189 aa)
   
          0.475
RB2654_16946
Uncharacterized protein (80 aa)
   
          0.469
RB2654_03464
Uncharacterized protein (154 aa)
   
          0.468
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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