STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ12238.1N-acetylmuramoyl-L-alanine amidase, family 2; COG3023 Negative regulator of beta-lactamase expression. (201 aa)    
Predicted Functional Partners:
EAQ10937.1
Putative Glycoside hydrolase; COG1472 Beta-glucosidase-related glycosidases.
 
  
 0.938
EAQ15021.1
COG3502 Uncharacterized protein conserved in bacteria.
 
      0.808
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
     
 0.727
EAQ14579.1
6-aminohexanoate-dimer hydrolase, putative; COG1680 Beta-lactamase class C and other penicillin binding proteins.
     
 0.720
EAQ12239.1
Hypothetical protein.
       0.717
EAQ13802.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
    
 0.693
EAQ13731.1
N-acetylmuramoyl-L-alanine amidase, family 3; COG0860 N-acetylmuramoyl-L-alanine amidase.
   
 
 0.688
EAQ12343.1
Hypothetical protein; COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases.
  
  
 0.683
EAQ13631.1
Peptidoglycan binding protein, putative; COG2989 Uncharacterized protein conserved in bacteria.
  
  
  0.678
gatA
glutamyl-tRNA amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
       0.675
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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