STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ12272.1Putative glycine betaine-binding abc transporter protein; COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components. (307 aa)    
Predicted Functional Partners:
EAQ12269.1
ABC glycine betaine/L-proline transporter, inner membrane subunit; COG4176 ABC-type proline/glycine betaine transport system, permease component.
 
 0.998
EAQ12268.1
ABC glycine betaine/L-proline transporter, ATPase subunit, ProV; COG4175 ABC-type proline/glycine betaine transport system, ATPase component.
 
 0.997
EAQ11941.1
Putative permease; COG4176 ABC-type proline/glycine betaine transport system, permease component.
 
 0.985
EAQ12856.1
Hypothetical protein; COG4175 ABC-type proline/glycine betaine transport system, ATPase component.
 
 0.973
EAQ11942.1
Hypothetical protein; COG4175 ABC-type proline/glycine betaine transport system, ATPase component.
 
 0.972
EAQ12854.1
Hypothetical protein; COG4176 ABC-type proline/glycine betaine transport system, permease component.
 
 0.967
EAQ12855.1
Hypothetical protein; COG4176 ABC-type proline/glycine betaine transport system, permease component.
 
 0.967
betI
Transcriptional regulator, BetI; Repressor involved in choline regulation of the bet genes.
 
     0.924
EAQ11940.1
COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components.
     
  0.921
EAQ12276.1
Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
 
   
 0.662
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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