STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ12280.1DNA-binding protein, putative; COG1396 Predicted transcriptional regulators. (463 aa)    
Predicted Functional Partners:
EAQ12281.1
Multidrug efflux pump, Major Facilitator Superfamily protein (MFS); COG0477 Permeases of the major facilitator superfamily.
       0.656
EAQ12279.1
Carbon monoxide dehydrogenase operon G protein.
       0.607
EAQ11837.1
Putative uncharacterized protein; Related to capsule biosynthesis enzyme; COG3550 Uncharacterized protein related to capsule biosynthesis enzymes.
  
 
 0.546
EAQ11952.1
Sensor histidine kinase; COG0591 Na+/proline symporter.
 
   
 0.519
nadE
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.506
EAQ12285.1
COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
     
 0.480
EAQ13525.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.476
glcB
Malate synthase G protein; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
 
   
 0.451
EAQ12282.1
Protease PrtA; COG2931 RTX toxins and related Ca2+-binding proteins.
       0.425
EAQ14437.1
COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
    
 0.404
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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