STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ12281.1Multidrug efflux pump, Major Facilitator Superfamily protein (MFS); COG0477 Permeases of the major facilitator superfamily. (406 aa)    
Predicted Functional Partners:
EAQ12280.1
DNA-binding protein, putative; COG1396 Predicted transcriptional regulators.
       0.656
EAQ14476.1
Efflux transporter, RND family, MFP subunit; COG0845 Membrane-fusion protein.
  
 0.543
EAQ12282.1
Protease PrtA; COG2931 RTX toxins and related Ca2+-binding proteins.
       0.531
EAQ10662.1
Putative multidrug-efflux transporter; COG0477 Permeases of the major facilitator superfamily.
  
   
 0.526
EAQ12179.1
Lincomycin resistance protein lmrb; COG0477 Permeases of the major facilitator superfamily.
  
   
 0.509
EAQ11208.1
Coenzyme a synthetase-like protein; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 
 0.492
EAQ12279.1
Carbon monoxide dehydrogenase operon G protein.
       0.470
EAQ11891.1
Fatty acid synthase transmembrane protein; COG3321 Polyketide synthase modules and related proteins.
  
 
 0.452
EAQ13449.1
Hypothetical protein; COG1257 Hydroxymethylglutaryl-CoA reductase.
   
 0.400
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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