STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ12304.1COG3807 Uncharacterized protein conserved in bacteria. (169 aa)    
Predicted Functional Partners:
EAQ13567.1
COG3814 Uncharacterized protein conserved in bacteria.
  
     0.735
EAQ10713.1
COG3820 Uncharacterized protein conserved in bacteria.
  
     0.719
EAQ12306.1
Putative transport system permease protein; COG0053 Predicted Co/Zn/Cd cation transporters; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
       0.679
EAQ12305.1
Hypothetical protein; COG3563 Capsule polysaccharide export protein.
       0.660
EAQ14086.1
COG4395 Uncharacterized protein conserved in bacteria.
  
     0.637
EAQ11946.1
COG3750 Uncharacterized protein conserved in bacteria.
  
     0.622
EAQ12024.1
DnaJ domain protein; COG2214 DnaJ-class molecular chaperone.
  
     0.606
EAQ11976.1
COG3761 NADH:ubiquinone oxidoreductase 17.2 kD subunit.
  
     0.571
EAQ11087.1
Transcriptional regulator, CarD family protein; COG1329 Transcriptional regulators, similar to M. xanthus CarD.
  
     0.562
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.560
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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