STRINGSTRING
RB2654_08862 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_08862" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_08862Uncharacterized protein (169 aa)    
Predicted Functional Partners:
RB2654_11954
Uncharacterized protein (252 aa)
   
          0.771
RB2654_08857
2-hydroxyacid dehydrogenase (315 aa)
              0.747
RB2654_08867
Uncharacterized protein (320 aa)
              0.734
RB2654_05365
Transcriptional regulator, CarD family protein (169 aa)
   
          0.727
RB2654_08872
Putative transport system permease protein (301 aa)
 
          0.707
RB2654_02599
Uncharacterized protein (168 aa)
   
          0.690
RB2654_13685
Putative Helicase/Exonuclease (985 aa)
   
          0.680
RB2654_04491
Disulfide bond formation protein, DsbB family protein (155 aa)
   
          0.646
RB2654_00890
Cobalt chelatase, pCobT subunit (625 aa)
   
          0.644
RB2654_12159
Uncharacterized protein (577 aa)
   
          0.637
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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