STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ13193.1Hypothetical protein; COG0491 Zn-dependent hydrolases, including glyoxylases. (295 aa)    
Predicted Functional Partners:
EAQ11891.1
Fatty acid synthase transmembrane protein; COG3321 Polyketide synthase modules and related proteins.
 
 
 0.753
EAQ11435.1
Sulfur oxidation F protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
 
  
  0.562
EAQ13192.1
Hypothetical protein.
       0.535
EAQ13476.1
Sarcosine oxidase, alpha subunit family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
  
 
 0.528
EAQ12982.1
Hypothetical protein; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
 
 0.524
EAQ10626.1
Transcriptional regulator, LuxR family protein; COG2771 DNA-binding HTH domain-containing proteins.
  
 
   0.489
EAQ14574.1
Transcriptional regulator, LuxR family protein; COG2771 DNA-binding HTH domain-containing proteins.
  
 
   0.476
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
 
 0.470
EAQ14919.1
COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 
   0.464
rsmH
Methyltransferase MraW/YabC; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
    
   0.463
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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