STRINGSTRING
RB2654_09024 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_09024" - Autoinducer-binding transcriptional regulator LuxR in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_09024Autoinducer-binding transcriptional regulator LuxR (225 aa)    
Predicted Functional Partners:
RB2654_09014
Autoinducer synthesis protein (213 aa)
 
     
  0.931
RB2654_09029
Uncharacterized protein (82 aa)
              0.859
RB2654_10758
DNA-binding response regulator, LuxR family protein (203 aa)
   
  0.723
RB2654_12314
Uncharacterized protein (44 aa)
   
          0.666
RB2654_17801
DNA-binding response regulator, LuxR family protein (225 aa)
   
  0.624
psuG
Pseudouridine-5’-phosphate glycosidase ; Catalyzes the reversible cleavage of pseudouridine 5’- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway (302 aa)
       
    0.622
RB2654_17461
Uncharacterized protein (182 aa)
   
          0.619
RB2654_21393
Uncharacterized protein (63 aa)
   
          0.596
RB2654_21398
Uncharacterized protein (63 aa)
   
          0.595
RB2654_05465
Uncharacterized protein (99 aa)
   
          0.578
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (7%) [HD]