STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ13328.1COG2764 Uncharacterized protein conserved in bacteria. (131 aa)    
Predicted Functional Partners:
EAQ11984.1
COG3865 Uncharacterized protein conserved in bacteria.
 
  
 0.777
ychF
GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
  
    0.609
EAQ11998.1
Oxidoreductase; COG0656 Aldo/keto reductases, related to diketogulonate reductase.
  
 
  0.603
EAQ12265.1
Hypothetical protein.
  
    0.591
EAQ13061.1
Uncharacterized conserved protein; Similar to polyketide cyclase (CypC); COG3832 Uncharacterized conserved protein.
 
     0.580
EAQ14468.1
COG2764 Uncharacterized protein conserved in bacteria.
 
 
 0.514
EAQ12143.1
Putative intracellular protease, PfpI family protein; COG0693 Putative intracellular protease/amidase.
  
 
  0.475
trpA
Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
    
  0.465
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
    
  0.458
EAQ11260.1
Thiamine-phosphate pyrophosphorylase, putative; COG0352 Thiamine monophosphate synthase.
    
  0.455
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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