STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ13436.1Hypothetical protein. (52 aa)    
Predicted Functional Partners:
EAQ13435.1
Peptidase, family S49; COG0616 Periplasmic serine proteases (ClpP class).
       0.849
EAQ13437.1
K+-dependent Na+/Ca+ exchanger related-protein; COG0530 Ca2+/Na+ antiporter.
       0.809
EAQ13438.1
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
    0.779
EAQ14194.1
Hypothetical protein; COG1752 Predicted esterase of the alpha-beta hydrolase superfamily.
  
     0.627
EAQ13434.1
COG0842 ABC-type multidrug transport system, permease component.
       0.567
EAQ11054.1
Hypothetical protein.
   
    0.548
EAQ13433.1
ABC multidrug/carbohydrate efflux transporter, ATPase subunit; COG1131 ABC-type multidrug transport system, ATPase component.
       0.548
EAQ11844.1
Replication protein C.
  
     0.526
EAQ11031.1
Glycosyl transferase, group 2 family protein.
  
     0.519
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
       0.448
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.