STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ12959.1COG3485 Protocatechuate 3,4-dioxygenase beta subunit. (232 aa)    
Predicted Functional Partners:
EAQ13608.1
PcaL, 3-oxoadipate enol-lactone hydrolase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
 
 0.846
EAQ11037.1
COG0015 Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 
 0.769
EAQ14808.1
Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases.
 
  
 0.769
EAQ14330.1
Mandelate racemase/muconate lactonizing enzyme family protein; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily.
  
 
 0.764
EAQ12892.1
COG1454 Alcohol dehydrogenase, class IV.
    
 0.724
EAQ14798.1
Glyoxalase family protein; COG0346 Lactoylglutathione lyase and related lyases.
  
  
 0.586
EAQ14956.1
Glyoxalase family protein; COG0346 Lactoylglutathione lyase and related lyases.
  
  
 0.573
EAQ12960.1
Transcriptional regulator, GntR family protein; COG1802 Transcriptional regulators.
       0.550
EAQ11750.1
Hypothetical protein; COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.
  
 
 0.513
EAQ11905.1
COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.
  
 
 0.513
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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