STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crcBCrcB-like protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (125 aa)    
Predicted Functional Partners:
EAQ13014.1
Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
     
 0.867
EAQ13012.1
Hypothetical protein; COG5387 Chaperone required for the assembly of the mitochondrial F1-ATPase.
       0.849
EAQ13016.1
ATPase, AAA family protein; COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase.
 
     0.825
EAQ13013.1
HAD-superfamily hydrolase, subfamily IA, variant 1; COG0546 Predicted phosphatases.
  
    0.821
EAQ13011.1
Glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
       0.642
EAQ13017.1
Possible LuxR family protein; COG2771 DNA-binding HTH domain-containing proteins.
       0.493
EAQ13010.1
Glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein; COG4597 ABC-type amino acid transport system, permease component.
       0.414
EAQ13009.1
Glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein; COG0765 ABC-type amino acid transport system, permease component.
       0.407
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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