STRINGSTRING
RB2654_11368 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_11368" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_11368Uncharacterized protein (174 aa)    
Predicted Functional Partners:
smc
Chromosome partition protein Smc ; Required for chromosome condensation and partitioning (1151 aa)
              0.666
RB2654_22018
Replication protein, putative (373 aa)
   
          0.579
RB2654_15811
Indolepyruvate ferredoxin oxidoreductase (128 aa)
   
          0.544
RB2654_20483
Uncharacterized protein (273 aa)
   
          0.518
RB2654_08147
Putative Ornithine decarboxylase (406 aa)
   
          0.491
RB2654_20048
Uncharacterized protein (195 aa)
   
          0.490
RB2654_13104
Uncharacterized protein (294 aa)
   
          0.489
RB2654_09094
Thioesterase-like (138 aa)
   
          0.476
RB2654_11378
Uncharacterized protein (120 aa)
              0.475
RB2654_22023
Replication protein (431 aa)
   
          0.440
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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