STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ13171.1TRAP transporter, 4TM/12TM fusion protein; COG4666 TRAP-type uncharacterized transport system, fused permease components. (872 aa)    
Predicted Functional Partners:
EAQ13170.1
TRAP transporter solute receptor, TAXI family protein; COG2358 TRAP-type uncharacterized transport system, periplasmic component.
 
  0.964
EAQ13172.1
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
 
    0.942
EAQ12766.1
Immunogenic protein; COG2358 TRAP-type uncharacterized transport system, periplasmic component.
 
  0.891
EAQ13279.1
COG2358 TRAP-type uncharacterized transport system, periplasmic component.
 
 
  0.881
EAQ10545.1
Hypothetical protein; COG2358 TRAP-type uncharacterized transport system, periplasmic component.
 
 
  0.875
EAQ11800.1
Hypothetical protein; COG2358 TRAP-type uncharacterized transport system, periplasmic component.
 
 
  0.872
EAQ10996.1
Probable immunogenic protein; COG2358 TRAP-type uncharacterized transport system, periplasmic component.
 
 
  0.836
EAQ13169.1
COG1737 Transcriptional regulators.
 
     0.710
EAQ12360.1
Bacterial extracellular solute-binding protein, family 7; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
   
 
  0.655
EAQ13168.1
Hypothetical protein; COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.633
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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