STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ13181.1COG3237 Uncharacterized protein conserved in bacteria; Belongs to the UPF0337 (CsbD) family. (65 aa)    
Predicted Functional Partners:
EAQ13175.1
Hypothetical protein.
 
  
 0.952
EAQ14730.1
COG3871 Uncharacterized stress protein (general stress protein 26).
  
    0.856
EAQ13702.1
Twin-arginine translocation pathway signal sequence domain protein, putative.
  
    0.762
EAQ13180.1
COG0642 Signal transduction histidine kinase.
 
     0.669
EAQ13179.1
Sigma24; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.662
EAQ14646.1
Hypothetical protein; COG2388 Predicted acetyltransferase.
  
    0.647
EAQ13178.1
RNA polymerase sigma-70 factor.
       0.605
EAQ12118.1
Osmotically inducible protein OsmC; COG1764 Predicted redox protein, regulator of disulfide bond formation.
  
  
 0.603
EAQ12760.1
Hypothetical protein; COG2910 Putative NADH-flavin reductase.
   
    0.548
EAQ13892.1
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
   
    0.548
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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