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RB2654_11919 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_11919" - DEAD/DEAH box helicase in Maritimibacter alkaliphilus
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
RB2654_11919DEAD/DEAH box helicase (681 aa)    
Predicted Functional Partners:
RB2654_10393
DNA polymerase I (932 aa)
   
  0.954
recA
Recombinase A ; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (361 aa)
     
  0.903
RB2654_11924
UPF0246 protein RB2654_11924 (258 aa)
              0.897
topA
DNA topoisomerase I ; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (846 aa)
   
  0.897
RB2654_12899
ATP-dependent RNA helicase, DEAD/DEAH box family protein (719 aa)
 
0.890
RB2654_21543
Putative uvrD/DNA Helicase II (794 aa)
   
  0.885
RB2654_23108
Uncharacterized protein (391 aa)
 
  0.879
RB2654_21183
DNA helicase (1569 aa)
 
0.871
RB2654_10978
ATPase, AAA family protein (436 aa)
   
 
  0.803
RB2654_11914
YGGT family protein (91 aa)
              0.791
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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