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RB2654_11924 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_11924" - UPF0246 protein RB2654_11924 in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_11924UPF0246 protein RB2654_11924 (258 aa)    
Predicted Functional Partners:
RB2654_11919
DEAD/DEAH box helicase (681 aa)
              0.897
RB2654_11914
YGGT family protein (91 aa)
              0.755
RB2654_11909
Uncharacterized protein (177 aa)
              0.546
mepA
Penicillin-insensitive murein endopeptidase (317 aa)
              0.443
RB2654_11894
Uncharacterized protein (318 aa)
              0.440
RB2654_11904
Membrane protein, putative (463 aa)
              0.437
RB2654_03674
Probable bacterioferritin (162 aa)
              0.435
RB2654_21183
DNA helicase (1569 aa)
              0.434
proS
Prolyl-tRNA synthetase ; Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction- proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) (444 aa)
              0.416
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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