STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ10711.1Penicillin-binding protein 1C; COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC. (685 aa)    
Predicted Functional Partners:
EAQ10710.1
Hypothetical protein; COG2373 Large extracellular alpha-helical protein.
   
 0.973
EAQ13733.1
Penicillin-binding protein 1A; COG5009 Membrane carboxypeptidase/penicillin-binding protein.
  
  
0.908
EAQ14690.1
COG0744 Membrane carboxypeptidase (penicillin-binding protein).
  
  
0.787
EAQ12956.1
Glycosyl transferase, family 51; COG0744 Membrane carboxypeptidase (penicillin-binding protein).
  
  
0.769
EAQ14600.1
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
  
  
 0.728
EAQ10566.1
COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4).
   
 
 0.688
EAQ11988.1
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
  
  
0.684
EAQ10709.1
Sensor histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
 
   
 0.627
EAQ14579.1
6-aminohexanoate-dimer hydrolase, putative; COG1680 Beta-lactamase class C and other penicillin binding proteins.
     
 0.622
EAQ11887.1
COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
     
 0.603
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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