STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ13831.1Hypothetical protein; COG0438 Glycosyltransferase. (384 aa)    
Predicted Functional Partners:
EAQ13832.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
 
  0.821
glgB
1,4-alpha-glucan branching enzyme (Glycogen branching enzyme); Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.799
EAQ13829.1
Glycosyl transferase, group 1; COG0438 Glycosyltransferase.
       0.773
EAQ13830.1
Hypothetical mannosyltransferase; COG0438 Glycosyltransferase.
       0.773
EAQ13833.1
Hypothetical protein.
     
 0.733
EAQ13836.1
Hypothetical protein.
   
   0.688
EAQ13828.1
Putative sugar nucleotide dehydratase; COG0451 Nucleoside-diphosphate-sugar epimerases.
  
 
  0.680
EAQ13834.1
Hypothetical protein; COG0395 ABC-type sugar transport system, permease component.
       0.650
EAQ13835.1
Putative lipopolysaccharide biosynthesis protein; COG0438 Glycosyltransferase.
       0.650
EAQ12434.1
COG0662 Mannose-6-phosphate isomerase.
  
 
 0.629
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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