STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ13859.1Probable HlyD family secretion protein; COG0845 Membrane-fusion protein. (389 aa)    
Predicted Functional Partners:
EAQ13860.1
Probable ATP-binding/permease fusion ABC transporter; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 0.992
EAQ13861.1
Hypothetical protein.
 
 0.985
EAQ10989.1
ABC transporter HlyB/MsbA family protein; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 0.963
EAQ13862.1
Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins.
 
 
 0.900
EAQ10988.1
COG1538 Outer membrane protein.
 
 0.890
EAQ10609.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
 
 0.880
EAQ14819.1
COG1538 Outer membrane protein.
 
 0.830
EAQ14997.1
Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins.
 
 
 0.733
EAQ13309.1
COG1538 Outer membrane protein.
  
 0.724
EAQ12955.1
COG4618 ABC-type protease/lipase transport system, ATPase and permease components.
  
 0.719
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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