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RB2654_12404 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_12404" - Pca operon transcriptional activator PcaQ in Maritimibacter alkaliphilus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_12404Pca operon transcriptional activator PcaQ (297 aa)    
Predicted Functional Partners:
RB2654_12409
Uncharacterized protein (609 aa)
 
          0.679
RB2654_12424
Acyl-CoA dehydrogenase (746 aa)
              0.636
RB2654_12419
Acetyl-CoA acetyltransferase (427 aa)
              0.636
RB2654_12414
Putative fatty acid oxidation complex alpha subunit (686 aa)
              0.636
RB2654_16801
Transcriptional regulator, LysR family protein (301 aa)
   
          0.624
RB2654_05857
Transcriptional regulator, LysR family protein (319 aa)
   
          0.607
RB2654_12399
Sulfatase family protein (551 aa)
 
          0.600
RB2654_12394
Uncharacterized protein (356 aa)
 
          0.574
RB2654_13730
Probable transcriptional regulator (293 aa)
   
          0.551
RB2654_09819
Transcriptional regulator, LysR family protein (295 aa)
   
          0.490
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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