STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ13878.1TRAP transporter, DctQ subunit; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component. (216 aa)    
Predicted Functional Partners:
EAQ13879.1
TRAP transporter, DctM subunit; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
 0.987
EAQ13877.1
TRAP transporter solute receptor, DctP family protein; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
 0.966
EAQ13867.1
COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system.
 
  
  0.869
EAQ13607.1
TrapT family, dctM subunit, C4-dicarboxylate transport; COG0609 ABC-type Fe3+-siderophore transport system, permease component.
  
 0.780
EAQ12786.1
TRAP dicarboxylate transporter, DctM subunit; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 0.780
EAQ11925.1
Hypothetical protein; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 0.780
EAQ13226.1
TRAP dicarboxylate transporter, DctM subunit, putative; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 0.780
EAQ14023.1
TRAP-T family transporter, DctM (12 TMs) subunit; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 0.780
EAQ14034.1
Putative membrane protein; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 0.780
EAQ14797.1
TrapT family, dctM subunit, C4-dicarboxylate transport; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 0.780
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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