Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAQ12670.1 | EAQ12948.1 | RB2654_15330 | RB2654_10638 | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | Pyridine nucleotide-disulphide oxidoreductase family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases. | 0.958 |
| EAQ12670.1 | EAQ12982.1 | RB2654_15330 | RB2654_10808 | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | Hypothetical protein; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family. | 0.955 |
| EAQ12670.1 | EAQ13883.1 | RB2654_15330 | RB2654_12459 | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | Putative nitrate reductase, large subunit protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.911 |
| EAQ12670.1 | EAQ13884.1 | RB2654_15330 | RB2654_12464 | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | Putative nitrite reductase [NAD(P)H], small subunit protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | 0.890 |
| EAQ12670.1 | EAQ13885.1 | RB2654_15330 | RB2654_12469 | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | BFD-like (2Fe-2S)-binding region protein; COG1251 NAD(P)H-nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.958 |
| EAQ12670.1 | EAQ13891.1 | RB2654_15330 | RB2654_12499 | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | COG3707 Response regulator with putative antiterminator output domain. | 0.517 |
| EAQ12670.1 | EAQ13991.1 | RB2654_15330 | RB2654_12999 | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | Uroporphyrin-III C-methyltransferase-like; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.610 |
| EAQ12948.1 | EAQ12670.1 | RB2654_10638 | RB2654_15330 | Pyridine nucleotide-disulphide oxidoreductase family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases. | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | 0.958 |
| EAQ12948.1 | EAQ12982.1 | RB2654_10638 | RB2654_10808 | Pyridine nucleotide-disulphide oxidoreductase family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases. | Hypothetical protein; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family. | 0.645 |
| EAQ12948.1 | EAQ13883.1 | RB2654_10638 | RB2654_12459 | Pyridine nucleotide-disulphide oxidoreductase family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases. | Putative nitrate reductase, large subunit protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.979 |
| EAQ12948.1 | EAQ13884.1 | RB2654_10638 | RB2654_12464 | Pyridine nucleotide-disulphide oxidoreductase family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases. | Putative nitrite reductase [NAD(P)H], small subunit protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | 0.959 |
| EAQ12948.1 | EAQ13991.1 | RB2654_10638 | RB2654_12999 | Pyridine nucleotide-disulphide oxidoreductase family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases. | Uroporphyrin-III C-methyltransferase-like; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.635 |
| EAQ12982.1 | EAQ12670.1 | RB2654_10808 | RB2654_15330 | Hypothetical protein; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family. | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | 0.955 |
| EAQ12982.1 | EAQ12948.1 | RB2654_10808 | RB2654_10638 | Hypothetical protein; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family. | Pyridine nucleotide-disulphide oxidoreductase family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases. | 0.645 |
| EAQ12982.1 | EAQ13883.1 | RB2654_10808 | RB2654_12459 | Hypothetical protein; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family. | Putative nitrate reductase, large subunit protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.440 |
| EAQ12982.1 | EAQ13884.1 | RB2654_10808 | RB2654_12464 | Hypothetical protein; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family. | Putative nitrite reductase [NAD(P)H], small subunit protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | 0.800 |
| EAQ12982.1 | EAQ13885.1 | RB2654_10808 | RB2654_12469 | Hypothetical protein; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family. | BFD-like (2Fe-2S)-binding region protein; COG1251 NAD(P)H-nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.645 |
| EAQ13883.1 | EAQ12670.1 | RB2654_12459 | RB2654_15330 | Putative nitrate reductase, large subunit protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | 0.911 |
| EAQ13883.1 | EAQ12948.1 | RB2654_12459 | RB2654_10638 | Putative nitrate reductase, large subunit protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Pyridine nucleotide-disulphide oxidoreductase family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases. | 0.979 |
| EAQ13883.1 | EAQ12982.1 | RB2654_12459 | RB2654_10808 | Putative nitrate reductase, large subunit protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Hypothetical protein; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family. | 0.440 |
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