Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAQ11391.1 | EAQ12670.1 | RB2654_23553 | RB2654_15330 | Naphthalene dioxygenase ferredoxin; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | 0.890 |
| EAQ11391.1 | EAQ13214.1 | RB2654_23553 | RB2654_09099 | Naphthalene dioxygenase ferredoxin; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | benzoyl-CoA oxygenase, A subunit; COG1145 Ferredoxin. | 0.687 |
| EAQ11391.1 | EAQ13883.1 | RB2654_23553 | RB2654_12459 | Naphthalene dioxygenase ferredoxin; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | Putative nitrate reductase, large subunit protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.402 |
| EAQ11391.1 | EAQ13885.1 | RB2654_23553 | RB2654_12469 | Naphthalene dioxygenase ferredoxin; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | BFD-like (2Fe-2S)-binding region protein; COG1251 NAD(P)H-nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.901 |
| EAQ12670.1 | EAQ11391.1 | RB2654_15330 | RB2654_23553 | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | Naphthalene dioxygenase ferredoxin; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | 0.890 |
| EAQ12670.1 | EAQ13214.1 | RB2654_15330 | RB2654_09099 | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | benzoyl-CoA oxygenase, A subunit; COG1145 Ferredoxin. | 0.969 |
| EAQ12670.1 | EAQ13883.1 | RB2654_15330 | RB2654_12459 | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | Putative nitrate reductase, large subunit protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.911 |
| EAQ12670.1 | EAQ13884.1 | RB2654_15330 | RB2654_12464 | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | Putative nitrite reductase [NAD(P)H], small subunit protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | 0.890 |
| EAQ12670.1 | EAQ13885.1 | RB2654_15330 | RB2654_12469 | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | BFD-like (2Fe-2S)-binding region protein; COG1251 NAD(P)H-nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.958 |
| EAQ13214.1 | EAQ11391.1 | RB2654_09099 | RB2654_23553 | benzoyl-CoA oxygenase, A subunit; COG1145 Ferredoxin. | Naphthalene dioxygenase ferredoxin; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | 0.687 |
| EAQ13214.1 | EAQ12670.1 | RB2654_09099 | RB2654_15330 | benzoyl-CoA oxygenase, A subunit; COG1145 Ferredoxin. | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | 0.969 |
| EAQ13214.1 | EAQ13883.1 | RB2654_09099 | RB2654_12459 | benzoyl-CoA oxygenase, A subunit; COG1145 Ferredoxin. | Putative nitrate reductase, large subunit protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.989 |
| EAQ13214.1 | EAQ13884.1 | RB2654_09099 | RB2654_12464 | benzoyl-CoA oxygenase, A subunit; COG1145 Ferredoxin. | Putative nitrite reductase [NAD(P)H], small subunit protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | 0.687 |
| EAQ13214.1 | EAQ13885.1 | RB2654_09099 | RB2654_12469 | benzoyl-CoA oxygenase, A subunit; COG1145 Ferredoxin. | BFD-like (2Fe-2S)-binding region protein; COG1251 NAD(P)H-nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.874 |
| EAQ13214.1 | EAQ13888.1 | RB2654_09099 | RB2654_12484 | benzoyl-CoA oxygenase, A subunit; COG1145 Ferredoxin. | Putative nitrate transporter; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | 0.549 |
| EAQ13214.1 | EAQ13889.1 | RB2654_09099 | RB2654_12489 | benzoyl-CoA oxygenase, A subunit; COG1145 Ferredoxin. | Putative nitrate ABC transporter, periplasmic nitrate-binding protein; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components. | 0.466 |
| EAQ13214.1 | EAQ13890.1 | RB2654_09099 | RB2654_12494 | benzoyl-CoA oxygenase, A subunit; COG1145 Ferredoxin. | Nitrate transporter component, nrtA; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components. | 0.466 |
| EAQ13883.1 | EAQ11391.1 | RB2654_12459 | RB2654_23553 | Putative nitrate reductase, large subunit protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Naphthalene dioxygenase ferredoxin; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | 0.402 |
| EAQ13883.1 | EAQ12670.1 | RB2654_12459 | RB2654_15330 | Putative nitrate reductase, large subunit protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | 0.911 |
| EAQ13883.1 | EAQ13214.1 | RB2654_12459 | RB2654_09099 | Putative nitrate reductase, large subunit protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | benzoyl-CoA oxygenase, A subunit; COG1145 Ferredoxin. | 0.989 |
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