STRINGSTRING
RB2654_13434 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_13434" - SAM-dependent methyltransferase in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_13434SAM-dependent methyltransferase (269 aa)    
Predicted Functional Partners:
RB2654_02144
Sarcosine oxidase, alpha subunit family protein (1004 aa)
   
 
  0.865
RB2654_08672
Aminomethyl transferase family protein (833 aa)
   
    0.862
RB2654_19268
Uncharacterized protein (352 aa)
   
 
    0.850
gcvP
Glycine dehydrogenase (aminomethyl-transferring) ; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein (953 aa)
     
 
    0.837
RB2654_13439
Competence protein F, putative (238 aa)
 
          0.826
hemH
Protoheme ferro-lyase ; Catalyzes the ferrous insertion into protoporphyrin IX (345 aa)
   
   
  0.813
RB2654_20753
NADH-ubiquinone oxidoreductase family protein (103 aa)
   
 
    0.803
nuoI
NDH-1 subunit I ; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (164 aa)
   
    0.802
RB2654_01315
NADH-quinone oxidoreductase (674 aa)
   
 
    0.783
RB2654_15265
NADH-ubiquinone oxidoreductase (322 aa)
 
 
    0.764
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (12%) [HD]