Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAQ12670.1 | EAQ12907.1 | RB2654_15330 | RB2654_10433 | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.846 |
| EAQ12670.1 | argB | RB2654_15330 | RB2654_10928 | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.741 |
| EAQ12670.1 | argC | RB2654_15330 | RB2654_02524 | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.624 |
| EAQ12670.1 | argD | RB2654_15330 | RB2654_10438 | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | COG4992 Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.769 |
| EAQ12670.1 | argG | RB2654_15330 | RB2654_13610 | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | COG0137 Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.955 |
| EAQ12670.1 | argH | RB2654_15330 | RB2654_11463 | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | COG0165 Argininosuccinate lyase. | 0.714 |
| EAQ12670.1 | argJ | RB2654_15330 | RB2654_13354 | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.541 |
| EAQ12670.1 | carA | RB2654_15330 | RB2654_08257 | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | COG0505 Carbamoylphosphate synthase small subunit; Belongs to the CarA family. | 0.933 |
| EAQ12670.1 | carB | RB2654_15330 | RB2654_10498 | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); Belongs to the CarB family. | 0.978 |
| EAQ12907.1 | EAQ12670.1 | RB2654_10433 | RB2654_15330 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | 0.846 |
| EAQ12907.1 | argB | RB2654_10433 | RB2654_10928 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.991 |
| EAQ12907.1 | argC | RB2654_10433 | RB2654_02524 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.979 |
| EAQ12907.1 | argD | RB2654_10433 | RB2654_10438 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | COG4992 Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.999 |
| EAQ12907.1 | argG | RB2654_10433 | RB2654_13610 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | COG0137 Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.996 |
| EAQ12907.1 | argH | RB2654_10433 | RB2654_11463 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | COG0165 Argininosuccinate lyase. | 0.996 |
| EAQ12907.1 | argJ | RB2654_10433 | RB2654_13354 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.996 |
| EAQ12907.1 | carA | RB2654_10433 | RB2654_08257 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | COG0505 Carbamoylphosphate synthase small subunit; Belongs to the CarA family. | 0.994 |
| EAQ12907.1 | carB | RB2654_10433 | RB2654_10498 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); Belongs to the CarB family. | 0.995 |
| argB | EAQ12670.1 | RB2654_10928 | RB2654_15330 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3. | 0.741 |
| argB | EAQ12907.1 | RB2654_10928 | RB2654_10433 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.991 |
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