STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ12346.1COG0642 Signal transduction histidine kinase. (459 aa)    
Predicted Functional Partners:
EAQ12348.1
PrrA (RegA), Response regulator; Involved in oxygen regulation of photosynthesis genes; COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain.
 
 0.994
EAQ14954.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
 0.992
EAQ11058.1
Dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.984
EAQ10709.1
Sensor histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
 
 0.966
EAQ10708.1
Sensor histidine kinase/response regulator; COG0784 FOG: CheY-like receiver.
 
 0.964
EAQ14953.1
Two-component hybrid sensor and regulator; COG0642 Signal transduction histidine kinase.
   
 0.955
EAQ12611.1
Two-component hybrid sensor and regulator; COG2202 FOG: PAS/PAC domain.
   
 0.941
EAQ11325.1
Sensory transduction histidine kinase; COG2202 FOG: PAS/PAC domain.
   
 0.939
EAQ10517.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
 0.816
EAQ12345.1
Hypothetical protein; COG2202 FOG: PAS/PAC domain.
   
 0.790
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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