STRINGSTRING
RB2654_13810 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_13810" - Shikimate dehydrogenase in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_13810Shikimate dehydrogenase (NADP(+)) ; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) (270 aa)    
Predicted Functional Partners:
RB2654_04209
Shikimate kinase ; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate (181 aa)
  0.999
RB2654_13815
Type II DHQase ; Catalyzes a trans-dehydration via an enolate intermediate (145 aa)
 
 
  0.999
aroB
3-dehydroquinate synthase (369 aa)
 
  0.990
RB2654_21298
Type II DHQase ; Catalyzes a trans-dehydration via an enolate intermediate (147 aa)
 
 
  0.986
RB2654_14535
Chorismate synthase (94 aa)
 
  0.977
aroA
5-enolpyruvylshikimate-3-phosphate synthase ; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate (441 aa)
 
  0.897
RB2654_19513
Shikimate dehydrogenase (NADP(+)) ; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) (294 aa)
   
   
 
0.881
RB2654_09089
Shikimate kinase ; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate (302 aa)
 
  0.859
RB2654_01570
Anthranilate synthase component I (502 aa)
 
 
  0.843
RB2654_10393
DNA polymerase I (932 aa)
         
  0.742
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (7%) [HD]